JMGF - Project Dependencies

Project Dependencies

compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

GroupId	ArtifactId	Version	Type
net.sf.bioutils.proteomics	proteomics	3.0.0	jar
net.sf.kerner-utils	kerner-utils	0.20.1	jar
net.sf.kerner-utils-io	kerner-utils-io	0.5.3	jar

test

The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:

GroupId	ArtifactId	Version	Type
junit	junit	4.11	jar

Project Transitive Dependencies

The following is a list of transitive dependencies for this project. Transitive dependencies are the dependencies of the project dependencies.

compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

GroupId	ArtifactId	Version	Type
net.sf.jfasta	jfasta	2.2.0	jar
net.sf.jranges	jranges	0.6.1	jar
net.sf.kerner-utils-collections	kerner-utils-collections	0.27.0	jar
org.slf4j	slf4j-api	1.7.2	jar

test

The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:

GroupId	ArtifactId	Version	Type
org.hamcrest	hamcrest-core	1.3	jar

Project Dependency Graph

Dependency Tree

net.sf.jmgf:jmgf:jar:1.2.0 Information

JMGF
Description: Java implementation for the Mascot Generic File (MGF) format. URL: http://jmgf.sourceforge.net/ Project License: The Apache Software License, Version 2.0

junit:junit:jar:4.11 (test) Information

JUnit
Description: JUnit is a regression testing framework written by Erich Gamma and Kent Beck. It is used by the developer who implements unit tests in Java. URL: http://junit.org Project License: Common Public License Version 1.0

org.hamcrest:hamcrest-core:jar:1.3 (test) Information

Hamcrest Core
Description: This is the core API of hamcrest matcher framework to be used by third-party framework providers. This includes the a foundation set of matcher implementations for common operations. URL: https://github.com/hamcrest/JavaHamcrest/hamcrest-core Project License: New BSD License

net.sf.bioutils.proteomics:proteomics:jar:3.0.0 (compile) Information

BioUtils - Proteomics
Description: Lightweight framework for handling biological and bioinformatical data related to proteomics. URL: https://sourceforge.net/projects/bioutils-proteo/ Project License: The Apache Software License, Version 2.0

net.sf.kerner-utils-collections:kerner-utils-collections:jar:0.27.0 (compile) Information

Kerner Utilities - Collections
Description: Commonly used utility classes (java.util.Collections related) URL: http://kerner-utils-co.sourceforge.net/ Project License: The Apache Software License, Version 2.0

net.sf.kerner-utils:kerner-utils:jar:0.20.1 (compile)
Kerner Utilities
Description: Commonly used utility classes.
URL: http://kerner-utils.sourceforge.net/
Project License: The Apache Software License, Version 2.0

Kerner Utilities
Description: Commonly used utility classes. URL: http://kerner-utils.sourceforge.net/ Project License: The Apache Software License, Version 2.0

net.sf.jranges:jranges:jar:0.6.1 (compile) Information

net.sf.kerner-utils:kerner-utils:jar:0.20.1 (compile)
Kerner Utilities
Description: Commonly used utility classes.
URL: http://kerner-utils.sourceforge.net/
Project License: The Apache Software License, Version 2.0

JRanges
Description: A Range is a collection of sequential positions and an interval. It is defined by the first position, inclusively, the last position, inclusively and an interval. Start and stop positions must both be a multiple of interval. URL: http://nexus.sonatype.org/oss-repository-hosting.html/jranges Project License: The Apache Software License, Version 2.0

Kerner Utilities
Description: Commonly used utility classes. URL: http://kerner-utils.sourceforge.net/ Project License: The Apache Software License, Version 2.0

net.sf.jranges:jranges:jar:0.6.1 (compile) Information

JRanges
Description: A Range is a collection of sequential positions and an interval. It is defined by the first position, inclusively, the last position, inclusively and an interval. Start and stop positions must both be a multiple of interval. URL: http://nexus.sonatype.org/oss-repository-hosting.html/jranges Project License: The Apache Software License, Version 2.0

net.sf.kerner-utils:kerner-utils:jar:0.20.1 (compile)
Kerner Utilities
Description: Commonly used utility classes.
URL: http://kerner-utils.sourceforge.net/
Project License: The Apache Software License, Version 2.0

Kerner Utilities
Description: Commonly used utility classes. URL: http://kerner-utils.sourceforge.net/ Project License: The Apache Software License, Version 2.0

junit:junit:jar:4.11 (compile) Information

net.sf.jfasta:jfasta:jar:2.2.0 (compile)
JFASTA
Description: Java implementation for the FASTA file format.
URL: http://jfasta.sourceforge.net/
Project License: The Apache Software License, Version 2.0
- net.sf.kerner-utils-io:kerner-utils-io:jar:0.5.3 (compile)
  Kerner Utilities - I/O
  Description: Commonly used utility classes (I/O related).
  URL: http://kerner-utils-io.sourceforge.net/
  Project License: The Apache Software License, Version 2.0

net.sf.kerner-utils-io:kerner-utils-io:jar:0.5.3 (compile)
Kerner Utilities - I/O
Description: Commonly used utility classes (I/O related).
URL: http://kerner-utils-io.sourceforge.net/
Project License: The Apache Software License, Version 2.0
- net.sf.kerner-utils:kerner-utils:jar:0.20.1 (compile)
  Kerner Utilities
  Description: Commonly used utility classes.
  URL: http://kerner-utils.sourceforge.net/
  Project License: The Apache Software License, Version 2.0
net.sf.kerner-utils:kerner-utils:jar:0.20.1 (compile)
Kerner Utilities
Description: Commonly used utility classes.
URL: http://kerner-utils.sourceforge.net/
Project License: The Apache Software License, Version 2.0
- org.slf4j:slf4j-api:jar:1.7.2 (compile)
  SLF4J API Module
  Description: The slf4j API
  URL: http://www.slf4j.org
  Project License: MIT License

JUnit
Description: JUnit is a regression testing framework written by Erich Gamma and Kent Beck. It is used by the developer who implements unit tests in Java. URL: http://junit.org Project License: Common Public License Version 1.0

JFASTA
Description: Java implementation for the FASTA file format. URL: http://jfasta.sourceforge.net/ Project License: The Apache Software License, Version 2.0

Kerner Utilities - I/O
Description: Commonly used utility classes (I/O related). URL: http://kerner-utils-io.sourceforge.net/ Project License: The Apache Software License, Version 2.0

Kerner Utilities - I/O
Description: Commonly used utility classes (I/O related). URL: http://kerner-utils-io.sourceforge.net/ Project License: The Apache Software License, Version 2.0

Kerner Utilities
Description: Commonly used utility classes. URL: http://kerner-utils.sourceforge.net/ Project License: The Apache Software License, Version 2.0

Kerner Utilities
Description: Commonly used utility classes. URL: http://kerner-utils.sourceforge.net/ Project License: The Apache Software License, Version 2.0

SLF4J API Module
Description: The slf4j API URL: http://www.slf4j.org Project License: MIT License

Licenses

New BSD License: Hamcrest Core

Common Public License Version 1.0: JUnit

MIT License: SLF4J API Module

The Apache Software License, Version 2.0: BioUtils - Proteomics, JFASTA, JMGF, JRanges, Kerner Utilities, Kerner Utilities - Collections, Kerner Utilities - I/O

Dependency File Details

Filename	Size	Entries	Classes	Packages	JDK Rev	Debug
junit-4.11.jar	239.30 kB	266	233	28	1.5	debug
proteomics-3.0.0.jar	139.29 kB	175	148	17	1.6	debug
jfasta-2.2.0.jar	18.36 kB	25	14	2	1.5	debug
jranges-0.6.1.jar	27.96 kB	45	28	7	1.5	debug
kerner-utils-0.20.1.jar	137.63 kB	173	145	17	1.5	debug
kerner-utils-collections-0.27.0.jar	112.72 kB	140	116	13	1.5	debug
kerner-utils-io-0.5.3.jar	31.31 kB	47	32	4	1.5	debug
hamcrest-core-1.3.jar	43.97 kB	52	45	3	1.5	debug
slf4j-api-1.7.2.jar	25.47 kB	34	23	3	1.5	debug
Total	Size	Entries	Classes	Packages	JDK Rev	Debug
9	776.00 kB	957	784	94	1.6	9
compile: 7	compile: 492.74 kB	compile: 639	compile: 506	compile: 63	-	compile: 7
test: 2	test: 283.26 kB	test: 318	test: 278	test: 31	-	test: 2

Dependency Repository Locations

Repo ID	URL	Release	Snapshot
sonatype-nexus-snapshots	https://oss.sonatype.org/content/repositories/snapshots	-	Yes
central	http://repo1.maven.org/maven2	Yes	-

Repository locations for each of the Dependencies.

Artifact	sonatype-nexus-snapshots	central
junit:junit:jar:4.11	-
net.sf.bioutils.proteomics:proteomics:jar:3.0.0	-	-
net.sf.jfasta:jfasta:jar:2.2.0	-	-
net.sf.jranges:jranges:jar:0.6.1	-	-
net.sf.kerner-utils:kerner-utils:jar:0.20.1	-
net.sf.kerner-utils-collections:kerner-utils-collections:jar:0.27.0	-	-
net.sf.kerner-utils-io:kerner-utils-io:jar:0.5.3	-
org.hamcrest:hamcrest-core:jar:1.3	-
org.slf4j:slf4j-api:jar:1.7.2	-
Total	sonatype-nexus-snapshots	central
9 (compile: 7, test: 2)	0	5

Project Documentation

Project Dependencies

compile

test

Project Transitive Dependencies

compile

test

Project Dependency Graph

Dependency Tree

Licenses

Dependency File Details

Dependency Repository Locations